Just unplug the cold start injector to see if it makes a difference. Can you smell fuel? Do you have little black spots coming out of the exhaust? That would indicate a rich condition, possibly caused by the injector.
Did you adjust the timing with the computer in the timing adjust mode? If not the computer will be compensating for whatever changes you made anyway.
One more simple thing to do is check your fault codes, then pull the EFI fuse, leave it out for 30 seconds, then put it back in. This will reset the ECU.
If all that still doesn't improve it, I guess the next step is to make sure one of the injectors isn't leaking while the car is off. Does it only do it first time? Like if you start it, it nearly dies, then it comes back up to idle, then you turn it off straight away and repeat does it do the same thing?
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